PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014091.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 383aa    MW: 44512.8 Da    PI: 9.7159
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014091.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR127.21.3e-0826101787
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87 
                            A+++G+ ++++ks+++ ++g +++ t++C + g+ ++++++     +++a+++++C  +l+ k ++  g w ++ +  +HnH
  Cse_sc014091.1_g050.1  26 ARSLGYVIVTQKSYTN-ESGFFYEVTLMCDRGGEYKPNETS-----KNSATKKINCPFQLVGKYSNmYGGWLMSVICDKHNH 101
                            8999*******99998.8999***************99877.....99****************999*************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MHTSPFFTNE VFKTREDLKG WAQTKARSLG YVIVTQKSYT NESGFFYEVT LMCDRGGEYK  60
PNETSKNSAT KKINCPFQLV GKYSNMYGGW LMSVICDKHN HLPAQHMEGH PYARRLTKEE  120
YQLVEDLTKK NVEPRDILSI IKAQNKDNVS TLKDIYSAQS KIRKAGRVAK STMQVLMSLL  180
HSNGYVHDFS TNDVTNELDA LFFVHPTSFN IWRAFPQAID HEETRLGLIY FGMEFTRRFS  240
NMCFKLCNRT MVKKYKERFV SAWTNVSFNF NNRTTNRAES QHAKLKRYLK SKKHNLDQFV  300
GCINEIVQSQ VTAINESFER SRTFRYHQHN IQCFNLLRGF VSNEALDMIL GEVRRLNDPK  360
FEYSMCGCQL RKGCGCNTPT RQG