PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014095.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Nin-like

Protein Properties

Length: 1174aa MW: 133684 Da PI: 6.0424

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014095.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	25.7	2.3e-08	1007	1047	4	44
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRW 44 ++s ed+++++ +++k+AAk+Lgv+l++LKr+ ++G++ W Cse_sc014095.1_g020.1 1007 KLSREDIEQHYGKTMKKAAKDLGVSLSTLKRKHNKLGMSGW 1047 7999****************************999999988 PP

Sequence ? help Back to Top
Protein Sequence Length: 1174 aa Download sequence
MADWFPKEGP SGFLESFPTY RLHSKPRSLF NGLWIFSNKD EGYESNSYSS DDVVTRMMIY 60 DKIKSAFSKM NYHSGIIIQF WAPVTIGSKH LLSTSGQPFA VSLLYQGVLK YRRLCVEHVY 120 DIDVNSKFRG TPASAFLNRF PEIAYKHPSV HHEVDPFFSN AFQECCLTIS IMMPIYCPSQ 180 TSSSCDCIGV IECSSWFTKC TDIFIEMNMK IKVGSGSGCV QSPRSYTIQG KYALNNELMS 240 SSFLTSLSYC EKLHVYKYFT LVQQTINGLK LARDQIQEAL KIVCQSHKIA FAQVWIASLD 300 ENHVHFSSSW EEAQTRQLLG LKLTGCINED SVKYSQNFQY YHDACDSIPL QPGQELVMKT 360 LQDYEPRFCD NISQLVTYNF MGLGSPIKCL TICLRSIHTG DFNYVFEFLW THNLFIPILL 420 EEILLNIKRC LPSFKFASGT EIGDKLHVIE VYNSTDKEIE KIDIFESKRL SPIPEALKEG 480 KKQVAVDDIA PLATKCKPAP VLTPQQVIEQ QFEISTTEIF LENIFGNGNL MADRDDERLS 540 EFLETFPTYI PYKTPETEGA FWIFCSKDEG SHNISSLGDL GTRMIHDKLK SAFSKVSNGG 600 ELIVQFWAPI TSGNRLVLST SGQPFAVSVF AEGLEEYRGR CVGYECNIDM NNDNNKVIKD 660 DIEQHEDHHP MTMISGPPTN AFLNRLPEAV LDTKNHHEGS LMRYASDCGL WTSYTLPIGC 720 PSQYYSSCIG VVECSSISSI NLEIVNTMNR ALEQEGLNVF NVQDRIPYNT INGLTLVRDE 780 IQVALKSVCE SHKIGVAQVW ISYEDENHVP FSFSSEDTQT TRRLALKLTG YNSVDEDSTV 840 FNWRFKEYYD ACDMVPLKKG EELVEKTLQD YEPRFCENIS QLGTDTLMGW VSTEDVAFSG 900 FTICMSIGTG DFNCAFEFIW HHNPNYVLML EALLLTLKRC LPRFNFASGT EHVIDVDNST 960 KSETKFFKIF KEKRLSPIPE TVDKGKNSVV VNYNVHSKEK HDTTEIKLSR EDIEQHYGKT 1020 MKKAAKDLGV SLSTLKRKHN KLGMSGWQGP DLPQRKAYNS NKKQRNESHT HEKDNGVIQD 1080 PSPFKRNENT VIKAEYADDI IKLHLRISEA TFVTVENEIG KKFKLKHGTF KIKYLDEDEE 1140 WILMTSDQDL SDCIQNSRTV DRSAVRLRVL LHNQ

Sequence ? help Back to Top

Protein Sequence Length: 1174 aa Download sequence

MADWFPKEGP SGFLESFPTY RLHSKPRSLF NGLWIFSNKD EGYESNSYSS DDVVTRMMIY  60
DKIKSAFSKM NYHSGIIIQF WAPVTIGSKH LLSTSGQPFA VSLLYQGVLK YRRLCVEHVY  120
DIDVNSKFRG TPASAFLNRF PEIAYKHPSV HHEVDPFFSN AFQECCLTIS IMMPIYCPSQ  180
TSSSCDCIGV IECSSWFTKC TDIFIEMNMK IKVGSGSGCV QSPRSYTIQG KYALNNELMS  240
SSFLTSLSYC EKLHVYKYFT LVQQTINGLK LARDQIQEAL KIVCQSHKIA FAQVWIASLD  300
ENHVHFSSSW EEAQTRQLLG LKLTGCINED SVKYSQNFQY YHDACDSIPL QPGQELVMKT  360
LQDYEPRFCD NISQLVTYNF MGLGSPIKCL TICLRSIHTG DFNYVFEFLW THNLFIPILL  420
EEILLNIKRC LPSFKFASGT EIGDKLHVIE VYNSTDKEIE KIDIFESKRL SPIPEALKEG  480
KKQVAVDDIA PLATKCKPAP VLTPQQVIEQ QFEISTTEIF LENIFGNGNL MADRDDERLS  540
EFLETFPTYI PYKTPETEGA FWIFCSKDEG SHNISSLGDL GTRMIHDKLK SAFSKVSNGG  600
ELIVQFWAPI TSGNRLVLST SGQPFAVSVF AEGLEEYRGR CVGYECNIDM NNDNNKVIKD  660
DIEQHEDHHP MTMISGPPTN AFLNRLPEAV LDTKNHHEGS LMRYASDCGL WTSYTLPIGC  720
PSQYYSSCIG VVECSSISSI NLEIVNTMNR ALEQEGLNVF NVQDRIPYNT INGLTLVRDE  780
IQVALKSVCE SHKIGVAQVW ISYEDENHVP FSFSSEDTQT TRRLALKLTG YNSVDEDSTV  840
FNWRFKEYYD ACDMVPLKKG EELVEKTLQD YEPRFCENIS QLGTDTLMGW VSTEDVAFSG  900
FTICMSIGTG DFNCAFEFIW HHNPNYVLML EALLLTLKRC LPRFNFASGT EHVIDVDNST  960
KSETKFFKIF KEKRLSPIPE TVDKGKNSVV VNYNVHSKEK HDTTEIKLSR EDIEQHYGKT  1020
MKKAAKDLGV SLSTLKRKHN KLGMSGWQGP DLPQRKAYNS NKKQRNESHT HEKDNGVIQD  1080
PSPFKRNENT VIKAEYADDI IKLHLRISEA TFVTVENEIG KKFKLKHGTF KIKYLDEDEE  1140
WILMTSDQDL SDCIQNSRTV DRSAVRLRVL LHNQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	936	940	TLKRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	1e-19	Nin-like family protein