PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014183.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 251aa    MW: 28625.7 Da    PI: 4.6337
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014183.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.46.8e-181461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT+eEd +l+++++ +G ++W++ ++  g+ R++k+c++rw +yl
  Cse_sc014183.1_g020.1 14 KGPWTQEEDRILINYINIHGHPNWRALPKLAGLLRCGKSCRLRWTNYL 61
                           79******************************99************97 PP
2Myb_DNA-binding48.52e-1567112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg+++ eE+e +++++  lG++ W++Ia++++ gRt++++k+ w+++l
  Cse_sc014183.1_g020.1  67 RGNFSREEEETIIELHGALGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MVRAPCCEKM GLKKGPWTQE EDRILINYIN IHGHPNWRAL PKLAGLLRCG KSCRLRWTNY  60
LNPDIKRGNF SREEEETIIE LHGALGNRWS AIAARLPGRT DNEIKNVWHT HLKKRVNPKP  120
NAKTSELEQR VEETKQDQGE VVESSSLDTS SSSQTSYNQV DSPQPSSTDT SSVSTSTNDN  180
FCMDDMVLEN FPEMDDEFWS EVFSGDNSDE FPIVHENIGQ LPSGCGYESN LHDDMDFWFN  240
VFTRGDELPQ I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-79MYB family protein