PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014184.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 372aa MW: 43224.4 Da PI: 6.3781

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014184.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	169.1	1.4e-52	58	186	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPt+eelv +yLk+kve+ +++l +vi ++d+y++ePwd++ ++e++ew+fFs++d+ky+tg+r+nrat++g+Wka Cse_sc014184.1_g020.1 58 VPPGFRFHPTEEELVGYYLKRKVESLQIDL-DVIVDIDLYRMEPWDIEGrckLGYEEQNEWFFFSHKDRKYPTGTRTNRATSAGFWKA 144 69**************************.99**********952432234677************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 tg+dk+vls k++ +g++ktLvfy+grap+g+k+dW+mheyrl Cse_sc014184.1_g020.1 145 TGRDKAVLS-KDRIIGMRKTLVFYNGRAPNGRKSDWIMHEYRL 186 *****.8899*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MEFFRYIENS GAQWVPLVQI DAKLKEHVHL LDFNKSLDLT LMVRNNQSIY MEFESSCVPP 60 GFRFHPTEEE LVGYYLKRKV ESLQIDLDVI VDIDLYRMEP WDIEGRCKLG YEEQNEWFFF 120 SHKDRKYPTG TRTNRATSAG FWKATGRDKA VLSKDRIIGM RKTLVFYNGR APNGRKSDWI 180 MHEYRLQSSH HAPPQATFAC VLSKHNSSML FQEEGWVVCR AFKKPTPIQP WNNGYHIRNT 240 NNFRALPPIN DTSNPSQSFF VNQARNSKQL LLRDTDQRPS ANNFLHENSN IIDSPSASRS 300 LATNEDLDYE SGINSNLYDN DWKSITNLLE SELDKPTPFP DSTMPLLAYH NDNNELDSRD 360 QASHFFGCFT EL

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MEFFRYIENS GAQWVPLVQI DAKLKEHVHL LDFNKSLDLT LMVRNNQSIY MEFESSCVPP  60
GFRFHPTEEE LVGYYLKRKV ESLQIDLDVI VDIDLYRMEP WDIEGRCKLG YEEQNEWFFF  120
SHKDRKYPTG TRTNRATSAG FWKATGRDKA VLSKDRIIGM RKTLVFYNGR APNGRKSDWI  180
MHEYRLQSSH HAPPQATFAC VLSKHNSSML FQEEGWVVCR AFKKPTPIQP WNNGYHIRNT  240
NNFRALPPIN DTSNPSQSFF VNQARNSKQL LLRDTDQRPS ANNFLHENSN IIDSPSASRS  300
LATNEDLDYE SGINSNLYDN DWKSITNLLE SELDKPTPFP DSTMPLLAYH NDNNELDSRD  360
QASHFFGCFT EL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71930.1	1e-101	NAC family protein