PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014239.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family M-type_MADS
Protein Properties Length: 104aa    MW: 11965.7 Da    PI: 9.5442
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014239.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF34.82.1e-111454145
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                           k+i+n+++ ++tf+kRr      A+ELS+LC+++  viifs++ k
  Cse_sc014239.1_g020.1 14 KKIDNERRLNITFAKRRLS----ANELSTLCGVQSTVIIFSPNEK 54
                           68***************86....******************9976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MAQTYPCRKK IEIKKIDNER RLNITFAKRR LSANELSTLC GVQSTVIIFS PNEKTVYSFG  60
DPSLEVLVSD YLSSTEGSPN EYSIFFIWRK DNNCTLHLTK GRKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36590.12e-15M-type_MADS family protein