PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014382.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 791aa MW: 92510.8 Da PI: 9.5374

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014382.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.4	1.3e-09	125	203	7	90
FAR1 7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 A+++GF ++k+++k++ ng++++ +++C+k+g e + + +r++++++ +C +l+ k + + +w + HnHel Cse_sc014382.1_g020.1 125 ASRLGFVIVKKRTKSE--NGQMYEINYMCTKSGIYEYHGSG----KRKTKTKKSNCPFRLVGKYRPtRYNWILRVKCDSHNHELL 203 899****9987766..999***********98877....899999**********9888898888889***96 PP

Sequence ? help Back to Top
Protein Sequence Length: 791 aa Download sequence
MFHNVHKQVP KAEVRFPNCR NSQVKNLKDY TIPDCNQELT SEESQRLHNT RLQPSWIAQV 60 KHMFYNVHKQ VPKAQVRFPN CKKTQVKNLK MAFGFHEEVS EDCPFIRQEA FRSHEEVTEW 120 VQNIASRLGF VIVKKRTKSE NGQMYEINYM CTKSGIYEYH GSGKRKTKTK KSNCPFRLVG 180 KYRPTRYNWI LRVKCDSHNH ELLESLHGVP YAMRLKDDEL SLVRELSGYS VRPRNILSTI 240 KGRNPDNVSS VRTIYNALDK FRRARVGDRT QIQVLYSHLT DLGYAYYPRV NEHNELKELF 300 FVHPTSNALW RTFPEIMLMD STYNTTMFKL PLLEIVGWVL QRVKEVIDET YYSRVIVTDR 360 DLALVGAYRA EFPTAHKLLY RWHIEQNLLK FMRNICSGID EYDSIKRRWD RLVKAPTSRL 420 FEQQYERLQQ RLLSLSIWIT GCEIRDTCLS RTSPMNIAPS ARQQRVELRL TTDDIRQFKN 480 VFTKASSFVK NNMITKLRSI YQPASDDTRE PVIQKNTRGR PGAKDKMGKA TQVPDLNEDP 540 DLNEVPIVDH RRSTATRSTQ VPNFNKEPAR HSSFTGPSDQ PKIRHRLYDG DAESEMFMGV 600 LPVLWHPYII SIYNVVGDGN CGFRCVAHGV WEQQHLWRQV RQMLLQHMDL HWQVYMGLWG 660 EDGFNELRRT IDWSGHGNAP PDRYMDMPNT GLVIAELIRR PVAFISLRGW NMCFPLISGP 720 NFSQRTDPLV IARVGDECSN CVAKDNEIKL LKTRIKTLEM ELELTRNHED HACQSGARLH 780 DLLNEMNNFH M

Sequence ? help Back to Top

Protein Sequence Length: 791 aa Download sequence

MFHNVHKQVP KAEVRFPNCR NSQVKNLKDY TIPDCNQELT SEESQRLHNT RLQPSWIAQV  60
KHMFYNVHKQ VPKAQVRFPN CKKTQVKNLK MAFGFHEEVS EDCPFIRQEA FRSHEEVTEW  120
VQNIASRLGF VIVKKRTKSE NGQMYEINYM CTKSGIYEYH GSGKRKTKTK KSNCPFRLVG  180
KYRPTRYNWI LRVKCDSHNH ELLESLHGVP YAMRLKDDEL SLVRELSGYS VRPRNILSTI  240
KGRNPDNVSS VRTIYNALDK FRRARVGDRT QIQVLYSHLT DLGYAYYPRV NEHNELKELF  300
FVHPTSNALW RTFPEIMLMD STYNTTMFKL PLLEIVGWVL QRVKEVIDET YYSRVIVTDR  360
DLALVGAYRA EFPTAHKLLY RWHIEQNLLK FMRNICSGID EYDSIKRRWD RLVKAPTSRL  420
FEQQYERLQQ RLLSLSIWIT GCEIRDTCLS RTSPMNIAPS ARQQRVELRL TTDDIRQFKN  480
VFTKASSFVK NNMITKLRSI YQPASDDTRE PVIQKNTRGR PGAKDKMGKA TQVPDLNEDP  540
DLNEVPIVDH RRSTATRSTQ VPNFNKEPAR HSSFTGPSDQ PKIRHRLYDG DAESEMFMGV  600
LPVLWHPYII SIYNVVGDGN CGFRCVAHGV WEQQHLWRQV RQMLLQHMDL HWQVYMGLWG  660
EDGFNELRRT IDWSGHGNAP PDRYMDMPNT GLVIAELIRR PVAFISLRGW NMCFPLISGP  720
NFSQRTDPLV IARVGDECSN CVAKDNEIKL LKTRIKTLEM ELELTRNHED HACQSGARLH  780
DLLNEMNNFH M

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	1e-07	FAR1 family protein