PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014496.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 253aa MW: 28967.1 Da PI: 10.1176

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014496.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.4	6e-14	143	234	1	79
EEEE-..-HHHHT.T-EE--HHH.HTT.............---..--SEEEEEETTS-EEEEEE...EEETTE.EEE-TTHHHHHHHH CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.............ggkkeesktltledesgrsWevkl.iyrkksgr.yvltkGWkeFvkan 72 f+k lt+ dv+ks grl +p k + ++ + ++e+ ++++ d++ r+W+++l +++ +s++ yv+++GW++ v+an Cse_sc014496.1_g020.1 143 FEKRLTKTDVTKSqGRLLIPVKQV-KNpgfltkdeknillE--NKEGLKVQVLDSERRTWTLNLgKWNMSSNEnYVFKSGWNKVVDAN 227 899*****99989*****.6669887766666432..23556777777777***7777777779********** PP T--TT-E CS B3 73 gLkegDf 79 gLke+ + Cse_sc014496.1_g020.1 228 GLKENMV 234 *9866 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MAKTTERVKE KRCRKGVARF LSFIEFRDDN LKVSEIVFAK LAEIRRKEST ANKKLVIKFG 60 GKTFLKNTKT NDSRRDKSPD NPVSKTIFNG VDHSSDDQSV ENTESEYSTN NPCLFKDLII 120 SDGGVDLNDY IRSIGGSNLE LMFEKRLTKT DVTKSQGRLL IPVKQVKNPG FLTKDEKNIL 180 LENKEGLKVQ VLDSERRTWT LNLGKWNMSS NENYVFKSGW NKVVDANGLK ENMVIRIWSF 240 RVDERLCYAL VGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G05930.1	2e-15	B3 family protein