PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014572.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 266aa MW: 30541.8 Da PI: 8.3208

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014572.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	54.6	3.5e-17	67	161	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeit.krtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtklel 83 ++Y++YAk++GF+v +++ s k++++i + fvCskeg++ k +++++r+ ++rt+Cka ++ + + + +++ + Cse_sc014572.1_g020.1 67 QYYKDYAKRAGFEVHLGQQYVSnKNKDKILdLKYFVCSKEGTNPAPKAGalkKKSNSRKVLSKRTDCKAVFRFRHIPGKGYWCYDFFE 154 69***************9995444445415779***99888777766777778889***********88888999* PP FAR1 84 eHnHela 90 HnH l+ Cse_sc014572.1_g020.1 155 GHNHILV 161 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MSENVKATIT LAPTMFQYYL NNEYEPVPHS VGIVSEVEGC KIWVPDIPVG QKPAYGMMYH 60 SLEQAYQYYK DYAKRAGFEV HLGQQYVSNK NKDKILDLKY FVCSKEGTNP APKAGALKKK 120 SNSRKVLSKR TDCKAVFRFR HIPGKGYWCY DFFEGHNHIL VSEEDSIFLV SSREVTYTQQ 180 VFLYQASQVN LGPVKGFNLL RQICGDYDFI GASSVDCKNY RRDVLDFIGK NDAHTLVEML 240 MNKKDFLPNF SFEYQTGENN ALTNLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	6e-15	FAR1 family protein