PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014633.1_g050.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YC
Protein Properties Length: 215aa    MW: 24629.1 Da    PI: 7.7891
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014633.1_g050.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC174.11.5e-54491521101
                  NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtr 85 
                            ql++ w++q   ie++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+tr
  Cse_sc014633.1_g050.1  49 QLQNLWANQyqeIEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLHKNDIAAAITR 136
                            79*****99999**************************************************************************** PP

                  NF-YC  86 tdifdflvdivprdel 101
                            tdifdflvdivpr++l
  Cse_sc014633.1_g050.1 137 TDIFDFLVDIVPRKDL 152
                            *************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MGNVPPALVG WSVPPSQTSG LTSPPAQLAQ QQLAYHHIHQ QQQQQLHQQL QNLWANQYQE  60
IEQTTDFKNH SLPLARIKKI MKADEDVRMI SAEAPVIFAR ACEMFILELT LRSWNHTEEN  120
KRRTLHKNDI AAAITRTDIF DFLVDIVPRK DLKDEIISST VPRGGLALHM NKKEHEANLL  180
TDLCFFYKDG SAYITKEVLQ EARNKFLTDH APRGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.33e-69NF-YC family protein