PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014705.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 449aa MW: 48691.8 Da PI: 5.6842

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014705.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.9	2.3e-05	345	379	15	54
HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ +++ L++l+ + +K + a++L +A+eYIk L Cse_sc014705.1_g020.1 345 KMGDRITALQQLVSPF-----GKTDTASVLSEAIEYIKFL 379 6778999999999998.....8****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MADNWWDSSS RTRPSLDSLS ASNSINLFQD SETASAATTT TTAATSMGGV TGASTSLHMM 60 GLGLSSPSLP QSLDWNQALV RGDQKGDGGF RNLLQDQDHS LSSSTDNFPL ENNQWRQQKM 120 YSASSQDSSS DFKQINARGF QLDQSMHDSD SESIITCQGL NSSFQSMDLY GSPSTIMQSL 180 FGSDNNQQQL GSRLDNNQGM SYSLYQPSYG GINMPGGNGG GGGAELSTSN WSKFPPQPQE 240 FVVNSPSKVQ LADMSGSQLH FANNARYWNP SAGGVNDIRP PFFSSLQMQL PTSTFEDKPK 300 VPPTARIAPK VVKESTSESS SSSTKRPRTE NQSPLPAAFK VKKEKMGDRI TALQQLVSPF 360 GKTDTASVLS EAIEYIKFLH EQVSVLSTPY MKNGAAMMQQ QAATDKPPDG PRQDLRSRGL 420 CLVPVSSTFP VTHETTVDFW TPTFGGTFR

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MADNWWDSSS RTRPSLDSLS ASNSINLFQD SETASAATTT TTAATSMGGV TGASTSLHMM  60
GLGLSSPSLP QSLDWNQALV RGDQKGDGGF RNLLQDQDHS LSSSTDNFPL ENNQWRQQKM  120
YSASSQDSSS DFKQINARGF QLDQSMHDSD SESIITCQGL NSSFQSMDLY GSPSTIMQSL  180
FGSDNNQQQL GSRLDNNQGM SYSLYQPSYG GINMPGGNGG GGGAELSTSN WSKFPPQPQE  240
FVVNSPSKVQ LADMSGSQLH FANNARYWNP SAGGVNDIRP PFFSSLQMQL PTSTFEDKPK  300
VPPTARIAPK VVKESTSESS SSSTKRPRTE NQSPLPAAFK VKKEKMGDRI TALQQLVSPF  360
GKTDTASVLS EAIEYIKFLH EQVSVLSTPY MKNGAAMMQQ QAATDKPPDG PRQDLRSRGL  420
CLVPVSSTFP VTHETTVDFW TPTFGGTFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20640.1	3e-58	bHLH family protein