PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014776.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NF-YA
Protein Properties Length: 204aa    MW: 23176.3 Da    PI: 5.8795
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014776.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA41.83.4e-13177204128
              CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeek 28 
                            d p+YVNaKQy++Il+RRq Rakle+++
  Cse_sc014776.1_g030.1 177 DGPIYVNAKQYNGILRRRQIRAKLEAQN 204
                            57***********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MGVLLTEEEN QKCEERVRVT QKFGYMMMQM VVAHGGCSAE RVVFGDDVTD GGVDDLEKIT  60
KVVYCFFKFN QDSSTGHSSD QSNKDDDILH NWSILKINES YKRLEEAQIK PILFMSNPNF  120
GMTDQQLEKN MPIVQNAYAD HYLNGLSAGY APHPMIQPHM VHIAPARVPL PLDLSEDGPI  180
YVNAKQYNGI LRRRQIRAKL EAQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.22e-19NF-YA family protein