PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014804.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 793aa MW: 86523.9 Da PI: 7.5935

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014804.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.1	3.3e-18	317	416	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ ++++d +g++W++++++ +++s++yvl+ G + +L++gD+v+F++ Cse_sc014804.1_g010.1 317 FEKVLSASDAGRIGRLVLPKACAEAYfpTINSSEGLPIRIQDVKGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQNLELQAGDTVIFSR 403 99************************555566777***********99899999999.*******************6 PP -SSSEE..EEEEE- CS B3 85 dgrsefelvvkvfr 98 + +++lvv+ ++ Cse_sc014804.1_g010.1 404 LN-PGEKLVVGCRK 416 54.66667777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 793 aa Download sequence
MSKICMNGLC GAQSSPQWKR GWPMKSGGFA TLCYSCGNAY DHVKYCERFH LNEPGWRECK 60 FCEKPIHCGC VVSKYLHECL DLGGISCLKC IRARGTQALK PMQNYHSDSP NGFLPFSGPW 120 HPSSISNRVN GGASVDKGNL TQLNEAIEKH QSSPLTPSIG LQIKQDENRF SSSKDSGKIF 180 SSTSSLFATP DNGLKALYEA IPQPSINYSL GNALATTKPP VLPSPNGTMD GRESEKVPSF 240 KQGQRSRLTF TKPAKSGASI RSPANKGTVS DNRVARPPAE GKGRSQLLPR YWPKMTDQEL 300 LQISGDLKSD CTITPLFEKV LSASDAGRIG RLVLPKACAE AYFPTINSSE GLPIRIQDVK 360 GKEWTFQFRF WPNNNSRMYV LEGVTPCIQN LELQAGDTVI FSRLNPGEKL VVGCRKAAVA 420 ADAQEGKTPA ANGVAGGTSG GNGNLTTKKV EHEGTANGVT PQKPVMQEKK KTRNIGPKNK 480 RLLIHNEDAM ELKVTWEEAH ELLRPSPTSK PTISMIEDCE FEEYDEPPVF GKKTIFTVDA 540 SGSQEQWGQC DNCSRWRRLP ADVLLPPKWT CADNVWDPDR CSCSAPDEIS TKDLERIFKS 600 GKDFKKRKLT EAKVVQEQQA PCGLDALASA AVLGETLGEL GESSSGPTTK HPRHRPGFKR 660 RFKTMMLRKK KRLSDEAAQK SLANGIVISD GNEIEVELGE SSGKGGQLDL NCDPDKEEEM 720 LMVDAAAAAS AAANASGIPL EWQNVLEVLV PCSQSKATTE TEGPPTQPPI EETPGPVDET 780 VEQKDEKVVE DGQ

Sequence ? help Back to Top

Protein Sequence Length: 793 aa Download sequence

MSKICMNGLC GAQSSPQWKR GWPMKSGGFA TLCYSCGNAY DHVKYCERFH LNEPGWRECK  60
FCEKPIHCGC VVSKYLHECL DLGGISCLKC IRARGTQALK PMQNYHSDSP NGFLPFSGPW  120
HPSSISNRVN GGASVDKGNL TQLNEAIEKH QSSPLTPSIG LQIKQDENRF SSSKDSGKIF  180
SSTSSLFATP DNGLKALYEA IPQPSINYSL GNALATTKPP VLPSPNGTMD GRESEKVPSF  240
KQGQRSRLTF TKPAKSGASI RSPANKGTVS DNRVARPPAE GKGRSQLLPR YWPKMTDQEL  300
LQISGDLKSD CTITPLFEKV LSASDAGRIG RLVLPKACAE AYFPTINSSE GLPIRIQDVK  360
GKEWTFQFRF WPNNNSRMYV LEGVTPCIQN LELQAGDTVI FSRLNPGEKL VVGCRKAAVA  420
ADAQEGKTPA ANGVAGGTSG GNGNLTTKKV EHEGTANGVT PQKPVMQEKK KTRNIGPKNK  480
RLLIHNEDAM ELKVTWEEAH ELLRPSPTSK PTISMIEDCE FEEYDEPPVF GKKTIFTVDA  540
SGSQEQWGQC DNCSRWRRLP ADVLLPPKWT CADNVWDPDR CSCSAPDEIS TKDLERIFKS  600
GKDFKKRKLT EAKVVQEQQA PCGLDALASA AVLGETLGEL GESSSGPTTK HPRHRPGFKR  660
RFKTMMLRKK KRLSDEAAQK SLANGIVISD GNEIEVELGE SSGKGGQLDL NCDPDKEEEM  720
LMVDAAAAAS AAANASGIPL EWQNVLEVLV PCSQSKATTE TEGPPTQPPI EETPGPVDET  780
VEQKDEKVVE DGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	659	670	KRRFKTMMLRKK
2	659	672	KRRFKTMMLRKKKR
3	667	673	LRKKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein