PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc014828.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 622aa MW: 71679.3 Da PI: 8.7241

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc014828.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	58.3	2.5e-18	66	162	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...........tekerrtraetrtgCkaklkvkkekdgkwev 78 Y++YA+e+GF vr+ ++++ g +++++f Cskeg+++ + k ++ +r r+e rt+Cka++ v ++ +k++v Cse_sc014828.1_g010.1 66 AYKDYASEAGFIVRRGHQTND--GGIVVNKEFLCSKEGTKKVKVKVkefdslkdncdAKAVKRIRSEFRTNCKARIYVVRS-GEKYRV 150 5*************98877..999**********99988889***988888999**********999.9* PP FAR1 79 tkleleHnHela 90 +++++eHnH ++ Cse_sc014828.1_g010.1 151 KNFVEEHNHGFF 162 *******986 PP

Sequence ? help Back to Top
Protein Sequence Length: 622 aa Download sequence
MRQNCASNEF VEDEILSADV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGILFDSV 60 EEAYKAYKDY ASEAGFIVRR GHQTNDGGIV VNKEFLCSKE GTKKVKVKVK EFDSLKDNCD 120 AKAVKRIRSE FRTNCKARIY VVRSGEKYRV KNFVEEHNHG FFTAEDRHLQ KSHRSMSLAH 180 HYFAIKASNL NIGPCMSFKF IAELLGGYEN VGATKIDFKN MSRDIYSYIG KYDAQMIIDK 240 FSILKEIDEN FTFEFKTNTD GQLSCLFWSD DTSKRNYEAF GDVLSFDAKC KTNMESDKPV 300 EFVQKWEALL DEFDLDKHKW LNDIFNIKER WIPAYFRDIP MSGFMKTTSR SESENYFFGH 360 NSNWSSTLVH FLFRYESALD QQRNNQRVEY DEETRSVNCS CLHFERRGLL CRHDFYTLRG 420 YGINKIPKQY LLRRWKKEAV VLPLFGSSFK ANGSSGSCIS KIYSKVNAII NHCGYDEEKL 480 GIFFEKLSTY ESGLESSTVA QSSALFLLSY SRLIGIPKPP AIDVFPPDIG SNKGGVTGAR 540 YKPSNNDVRF KDPKECGKNL RKCRICNILT DHDYRNCPNN PDRKVLTAKK DIKKTKRNGK 600 KVKRKSNKAN VEHGTEEFNF KE

Sequence ? help Back to Top

Protein Sequence Length: 622 aa Download sequence

MRQNCASNEF VEDEILSADV NVEENEEVNS PDFFTSTSML IKPVVVKTLV PVEGILFDSV  60
EEAYKAYKDY ASEAGFIVRR GHQTNDGGIV VNKEFLCSKE GTKKVKVKVK EFDSLKDNCD  120
AKAVKRIRSE FRTNCKARIY VVRSGEKYRV KNFVEEHNHG FFTAEDRHLQ KSHRSMSLAH  180
HYFAIKASNL NIGPCMSFKF IAELLGGYEN VGATKIDFKN MSRDIYSYIG KYDAQMIIDK  240
FSILKEIDEN FTFEFKTNTD GQLSCLFWSD DTSKRNYEAF GDVLSFDAKC KTNMESDKPV  300
EFVQKWEALL DEFDLDKHKW LNDIFNIKER WIPAYFRDIP MSGFMKTTSR SESENYFFGH  360
NSNWSSTLVH FLFRYESALD QQRNNQRVEY DEETRSVNCS CLHFERRGLL CRHDFYTLRG  420
YGINKIPKQY LLRRWKKEAV VLPLFGSSFK ANGSSGSCIS KIYSKVNAII NHCGYDEEKL  480
GIFFEKLSTY ESGLESSTVA QSSALFLLSY SRLIGIPKPP AIDVFPPDIG SNKGGVTGAR  540
YKPSNNDVRF KDPKECGKNL RKCRICNILT DHDYRNCPNN PDRKVLTAKK DIKKTKRNGK  600
KVKRKSNKAN VEHGTEEFNF KE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-21	FAR1 family protein