PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014932.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 218aa    MW: 25112.7 Da    PI: 5.968
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014932.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF90.49e-291059251
                           ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                 SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                           rien   rqvtfskRrng+lKKA+ELSvLCdaeva+iifs++gkl e+ss
  Cse_sc014932.1_g010.1 10 RIENAASRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLCEFSS 59
                           8***********************************************96 PP
2K-box78.51.7e-2679172497
                  K-box   4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeen 91 
                             +++s+e+a++++l++e a + k+ie L+  +R+llGe+L+  +++eLq++eqqLe+s++ iR++K++++ eqi+elq kek+l ++n
  Cse_sc014932.1_g010.1  79 DNSSSVEDAEWQHLKNETASMTKKIEALELAKRKLLGEGLGASTIEELQEIEQQLERSVSIIRARKMQVYNEQIQELQAKEKMLASQN 166
                            445559********************************************************************************** PP

                  K-box  92 kaLrkk 97 
                             +L+ k
  Cse_sc014932.1_g010.1 167 AMLNVK 172
                            **9866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MVRGKTQMRR IENAASRQVT FSKRRNGLLK KAFELSVLCD AEVALIIFSP RGKLCEFSSS  60
SMEETIERYR NHVKEVQTDN SSSVEDAEWQ HLKNETASMT KKIEALELAK RKLLGEGLGA  120
STIEELQEIE QQLERSVSII RARKMQVYNE QIQELQAKEK MLASQNAMLN VKCIIPTEEN  180
TVEGRENLQI VEYEENSYVE TELFIGLPEK RMKQDKPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.13e-68MIKC_MADS family protein