PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc014935.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 243aa    MW: 27965.2 Da    PI: 6.5067
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc014935.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.41.4e-071548133
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.T CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.k 33
                           +g W+++Ed++l+ +v  +G  +W++++   g +
  Cse_sc014935.1_g020.1 15 KGLWSPDEDQKLKYYVMNYGHSCWSSVPINAGtL 48
                           678*************************999963 PP
2Myb_DNA-binding23.61.2e-0770942348
                           -HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                           +W+  a++++  Rt++++k++w+++l
  Cse_sc014935.1_g020.1 70 RWSQMAQHLP-ERTDNEIKNYWNSHL 94
                           5*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MRCKASEKPC PKHKKGLWSP DEDQKLKYYV MNYGHSCWSS VPINAGTLAK ERKELQIEVD  60
KLSKARIEAR WSQMAQHLPE RTDNEIKNYW NSHLKKRIEK LQHLQTNPKT DYISTNMRST  120
EPSSSCPNAA SFMNSSSSDM NQLVPPASQI TTLPKILFAD WISLDEFQKD LGKSSDQPFS  180
HGSNYVVSHM HDYHEVSTQE NKDSQNCLIN GSNNGDMFQS HMTIDENFSF IDGDFNLDDF  240
IYM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.12e-28MYB family protein