PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015049.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 227aa    MW: 26141.7 Da    PI: 8.5635
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015049.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.72.6e-24171431128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                            +p G+rF Ptdee++v+yL++kv + +l++ ++i+   ++++ +P+ Lp      +++ y+F+k++  ++       +  sgyW    
  Cse_sc015049.1_g010.1  17 MPIGYRFCPTDEEIIVHYLRPKVFSFPLPA-TAIHLYnNLFNQHPSCLPGD---PKEKRYYFCKTSDINH------ATNVSGYWMPNI 94 
                            699**************************9.67888779**********33...45678****9877532......23349***9887 PP

                    NAM  88 kdkevlsk......kgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                            k++   ++       ++ +g kk++vfy  k ++++g+kt+W++h+yr+
  Cse_sc015049.1_g010.1  95 KNNVNAHElilatgCNHPIGFKKSFVFYelKDQRRSGSKTSWILHQYRV 143
                            755444446776777788**********76678999***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MDTPTVATPT TTVTVQMPIG YRFCPTDEEI IVHYLRPKVF SFPLPATAIH LYNNLFNQHP  60
SCLPGDPKEK RYYFCKTSDI NHATNVSGYW MPNIKNNVNA HELILATGCN HPIGFKKSFV  120
FYELKDQRRS GSKTSWILHQ YRVLYPLPIK MEEWVVCSIH MKSKKVKKNK KQEGSSKRVK  180
RCHKKNDISH VVTDDDSTSS ASSGITFNNL DDRKDEDEED EEESKVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14000.11e-25NAC family protein