PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015142.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

G2-like

Protein Properties

Length: 1119aa MW: 125603 Da PI: 8.3805

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015142.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	100.1	1.5e-31	260	313	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ Cse_sc015142.1_g010.1 260 PRMRWTSTLHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 313 8****************************************************7 PP
2	Myb_DNA-binding	45.1	2.3e-14	261	312	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ Cse_sc015142.1_g010.1 261 RMRWTSTLHSRFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 312 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1119 aa Download sequence
MPLEGIFIEP QPPSSSSSTP LPDLSLNISL PNSNSLLSSI RNTNTAVISI ESPSKSNTLL 60 QNTYTDLSLT NPSRNLSRRE QDKSQNPFLH RHHQNHPHMF NQQMNSSNTQ NLSHLNQSVS 120 LLDVSDCLRP IKGIPVYHNH PFPFLPNLDH STMEKDPKTC YFPSSSASTS PYFGSSGGHM 180 PFLNPGLNGP SSSNYRPPGG CGSSGGTRFN GLSSSYAHHH YYHNHNQYGG GGPTSHEVSH 240 GLMRSRFLPK LPTKRSMRAP RMRWTSTLHS RFVHAVELLG GHERATPKSV LELMDVKDLT 300 LAHVKSHLQM YRTVKTTDKP AASSGQSDGS GEDDVSTIGS GGVRRFVDQR GSADQQESDC 360 PNFSANTTST ATLWNNSSSS QESKQVQAFQ PYNATRKQQH HPATSKKATT QVANSTNHNK 420 QQLARKQQDH KCHSPPPQAT TPQATTMSSS PFDTQEAMRF KENELVLVEQ LTKHQVAPRI 480 ILSSLKKSDP NNVSNIKTIY NAQNKIHGAI RGDMTPIQLL LAHLRRKGYT YYPRVNDHTN 540 KLEEIFFVHP TSYSLWTTFP EIMLIDSTYN TTLFKLPFFT IVGVTSTNIT FSTAFSFLNC 600 EKEPNFKWVL ECVKMVIEEQ YYPRVIVTDR DLAFGQTTTC RVERQHALLK LYLGSTQSGL 660 DMLLCSIDKI IVAQETAKRD SFNTSKIKKL HSCKGTLFNE LRYNVSKDAL LLILAQSKRD 720 VDPHECGHQL RLVYGLPCYH ELYYLQIHGS PILHVDKFWR TLSVPWPRVP HTHTPEEPQE 780 PKEPQYLSCQ DDVDKFQNVF TKASSFVKKN MLNMLRGIYA PESVSTRQPA VKESTRGRPS 840 AKDKKSKAKQ NIPDLNKEPP QGTAEAIQNL KNSYVGEPSN IPDLNEEPSE GDLRHELYIP 900 DDDSEYFMTR IPPLFRRWIL GIVNVEGDGN CGYRALGVGP APHDYWMTMP DTGAAIATAL 960 NRPIISDPAP VLPHLLLQES DDIQWRDIQC VSNTPARVES PDYVLSSQSY VPPSPAISPA 1020 ADEENFIHRP PVLPHLLLQP SRVDEYEREI AVLRRRISEL EFCVGQMAAS LEGLRLGHAT 1080 RKSFLVSLST PGTEDYGCRY FMWKDVFQQK HFGQGSSST

Sequence ? help Back to Top

Protein Sequence Length: 1119 aa Download sequence

MPLEGIFIEP QPPSSSSSTP LPDLSLNISL PNSNSLLSSI RNTNTAVISI ESPSKSNTLL  60
QNTYTDLSLT NPSRNLSRRE QDKSQNPFLH RHHQNHPHMF NQQMNSSNTQ NLSHLNQSVS  120
LLDVSDCLRP IKGIPVYHNH PFPFLPNLDH STMEKDPKTC YFPSSSASTS PYFGSSGGHM  180
PFLNPGLNGP SSSNYRPPGG CGSSGGTRFN GLSSSYAHHH YYHNHNQYGG GGPTSHEVSH  240
GLMRSRFLPK LPTKRSMRAP RMRWTSTLHS RFVHAVELLG GHERATPKSV LELMDVKDLT  300
LAHVKSHLQM YRTVKTTDKP AASSGQSDGS GEDDVSTIGS GGVRRFVDQR GSADQQESDC  360
PNFSANTTST ATLWNNSSSS QESKQVQAFQ PYNATRKQQH HPATSKKATT QVANSTNHNK  420
QQLARKQQDH KCHSPPPQAT TPQATTMSSS PFDTQEAMRF KENELVLVEQ LTKHQVAPRI  480
ILSSLKKSDP NNVSNIKTIY NAQNKIHGAI RGDMTPIQLL LAHLRRKGYT YYPRVNDHTN  540
KLEEIFFVHP TSYSLWTTFP EIMLIDSTYN TTLFKLPFFT IVGVTSTNIT FSTAFSFLNC  600
EKEPNFKWVL ECVKMVIEEQ YYPRVIVTDR DLAFGQTTTC RVERQHALLK LYLGSTQSGL  660
DMLLCSIDKI IVAQETAKRD SFNTSKIKKL HSCKGTLFNE LRYNVSKDAL LLILAQSKRD  720
VDPHECGHQL RLVYGLPCYH ELYYLQIHGS PILHVDKFWR TLSVPWPRVP HTHTPEEPQE  780
PKEPQYLSCQ DDVDKFQNVF TKASSFVKKN MLNMLRGIYA PESVSTRQPA VKESTRGRPS  840
AKDKKSKAKQ NIPDLNKEPP QGTAEAIQNL KNSYVGEPSN IPDLNEEPSE GDLRHELYIP  900
DDDSEYFMTR IPPLFRRWIL GIVNVEGDGN CGYRALGVGP APHDYWMTMP DTGAAIATAL  960
NRPIISDPAP VLPHLLLQES DDIQWRDIQC VSNTPARVES PDYVLSSQSY VPPSPAISPA  1020
ADEENFIHRP PVLPHLLLQP SRVDEYEREI AVLRRRISEL EFCVGQMAAS LEGLRLGHAT  1080
RKSFLVSLST PGTEDYGCRY FMWKDVFQQK HFGQGSSST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16560.1	5e-46	G2-like family protein