PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015204.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

NAC

Protein Properties

Length: 179aa MW: 20916.8 Da PI: 9.2991

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015204.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	183.7	4.4e-57	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWka 85 +ppGfrFhPtdeelv++yL+kkv++k+++l +vik+vd+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk g+Wka Cse_sc015204.1_g010.1 7 VPPGFRFHPTDEELVDYYLRKKVASKRIDL-DVIKDVDLYKIEPWDLQElcKLGTeEQNEWYFFSHKDKKYPTGTRTNRATKIGFWKA 93 69**************************.9***********954544442556************************* PP NAM 86 tgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129 tg+dk+++s k++lvg++ktLvfykgrap+g+k+dW+mheyrle Cse_sc015204.1_g010.1 94 TGRDKAIYS-KHNLVGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 *****.899***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 179 aa Download sequence
MDTFSHVPPG FRFHPTDEEL VDYYLRKKVA SKRIDLDVIK DVDLYKIEPW DLQELCKLGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATKIGF WKATGRDKAI YSKHNLVGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN AMTQASDISI FQHSRSPICT SFCPTSIHST VMALVSTLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	2e-96	NAC family protein