PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015241.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family B3
Protein Properties Length: 287aa    MW: 32937.9 Da    PI: 7.4221
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015241.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3101.16.2e-32641681100
                            EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 
                            f+k ltpsdv+k++rlv+pk++ae+h     +++++++  l +ede g+ W+++++y+++s++yvltkGW+++vk+++L++gD+v+F+
  Cse_sc015241.1_g010.1  64 FEKPLTPSDVGKLNRLVIPKQHAEKHfpissSEDQQKGLLLAFEDELGKLWRFRYSYWNSSQSYVLTKGWSRYVKDKRLDAGDVVLFE 151
                            99****************************9666678899************************************************ PP

                            E-SS.SEE..EEEEE-SS CS
                     B3  84 ldgr.sefelvvkvfrks 100
                             ++  ++ +++++++r+s
  Cse_sc015241.1_g010.1 152 -KHVlDCDRMFIGWRRRS 168
                            .566689999*****985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MLQNHLSITS FPLFFIQTKS THLIIMETQN NPIILHHHQP SYNHHIQHDL TTTTTNHYPK  60
QLMFEKPLTP SDVGKLNRLV IPKQHAEKHF PISSSEDQQK GLLLAFEDEL GKLWRFRYSY  120
WNSSQSYVLT KGWSRYVKDK RLDAGDVVLF EKHVLDCDRM FIGWRRRSLP VDDGMTAVAA  180
AAAAVVARPV HGGEWGSGVY YDAQSGYPTA HHLHAGEAYE NVDSYQRRGV ATRRLRLFGV  240
NLECPYDSEP STSDGSSHGG QVDQQYNYGS YDLHHNMMSM RYHQHEG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36080.13e-61B3 family protein