PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015318.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

FAR1

Protein Properties

Length: 363aa MW: 41930.5 Da PI: 7.5345

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015318.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.4	3.2e-25	74	163	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYneY+ + GF +rk++ ++ +++++++r f C+keg+++ ++k+ +++ ++r trtgCka ++v+++++g+w+v+k++ eHnH Cse_sc015318.1_g070.1 74 NFYNEYGLSKGFGIRKHQLNRCIDTNKVYRRVFSCNKEGFKDMNDKRqLRDNVKRRCITRTGCKALMQVTLSSQGEWVVDKFSDEHNH 161 6*******************99999***********99988467778899****************************** PP FAR1 88 el 89 ++ Cse_sc015318.1_g070.1 162 PF 163 98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MSSAMNFSRS DPNHEDQIIS DGNTDDFEHT LIDDIDNNGY LIEEEVTDLT HSYDRSLRYT 60 ILGRTFATSD DAYNFYNEYG LSKGFGIRKH QLNRCIDTNK VYRRVFSCNK EGFKDMNDKR 120 QLRDNVKRRC ITRTGCKALM QVTLSSQGEW VVDKFSDEHN HPFDSPSKVI KQRSHSIFHR 180 SNECKDVVTL LSKAGMKPSE ITKIVNAFRG GEEDQLTRVQ CSTIVSEERK CNLGKECHGI 240 IMHFKENRLH LFLKMKRYLY LLDGVLQNVF WADGRSRTSY CQFGDVVVFD VTYRTNKFSF 300 PFAPFVGVNH HGQSILLGAA LLENETEKTF KWLFEQFLKC MHECPPVALI TDQDMAMGKA 360 ISK

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MSSAMNFSRS DPNHEDQIIS DGNTDDFEHT LIDDIDNNGY LIEEEVTDLT HSYDRSLRYT  60
ILGRTFATSD DAYNFYNEYG LSKGFGIRKH QLNRCIDTNK VYRRVFSCNK EGFKDMNDKR  120
QLRDNVKRRC ITRTGCKALM QVTLSSQGEW VVDKFSDEHN HPFDSPSKVI KQRSHSIFHR  180
SNECKDVVTL LSKAGMKPSE ITKIVNAFRG GEEDQLTRVQ CSTIVSEERK CNLGKECHGI  240
IMHFKENRLH LFLKMKRYLY LLDGVLQNVF WADGRSRTSY CQFGDVVVFD VTYRTNKFSF  300
PFAPFVGVNH HGQSILLGAA LLENETEKTF KWLFEQFLKC MHECPPVALI TDQDMAMGKA  360
ISK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-59	FAR1 family protein