PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015330.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GRAS
Protein Properties Length: 744aa    MW: 83277.7 Da    PI: 4.8548
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015330.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS358.11.3e-1093717412373
                   GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89 
                            ++lL++cA+ v+++d + a++ L +++++asp+gd+ qRla+ f+ +L+arla+++s+ y++ ++ + s    +e+l+a +++  ++P
  Cse_sc015330.1_g020.1 371 RTLLVNCAQSVAADDRKTANEQLRQIRQHASPTGDAPQRLAHIFAAGLEARLAGTGSQFYASKSAMTIS---AAEKLKACQVYLSACP 455
                            689***************************************************999999877777776...9*************** PP

                   GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                            ++k++ + aN+ I+ea+  ++++Hi+Df+i++G+QWp L++ La+Rp+gpp+lRiTg++ p++g   +e +eetg+rLa+++++ +vp
  Cse_sc015330.1_g020.1 456 FVKIAIFFANKVIYEAALASSTLHIVDFGIEYGFQWPVLIKHLAERPGGPPKLRITGIELPKPGfrPAEGVEETGRRLANYCAKYNVP 543
                            ***************************************************************9*9********************** PP

                   GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealey 263
                            fe+n+++++++e++++e+L+++++E+laV+ + + ++llde++ ++ +rd vLkl+++++P+++v +  + +++s+ F++rf eal +
  Cse_sc015330.1_g020.1 544 FEYNAIATQNWETIKVEDLKLQRNECLAVHTQTRFKNLLDETLVVDCPRDGVLKLIRDMKPDIFVPTVVNGSYSSPFFVTRFREALFH 631
                            ******999******************************************************************************* PP

                   GRAS 264 ysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrv 351
                            +s++fd++ea+l r++e+r + E+e+ gre++nv+acegaer+er et+++W+ rl +aGFk  pl+ +++++ ++ ++  + + +  
  Cse_sc015330.1_g020.1 632 FSSMFDMVEATLDRNDEQRFNFEKEFCGREVMNVIACEGAERVERPETYKQWQVRLLRAGFKYKPLNRDVVSKLRAKVKAGYHKDFVF 719
                            *******************************************************************************999888*** PP

                   GRAS 352 eeesgslvlgWkdrpLvsvSaW 373
                            +e+ +++++gWk+r L + S+W
  Cse_sc015330.1_g020.1 720 DEDGKWVLQGWKGRILHASSCW 741
                            ********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    
MFLPPESVVV VKINNQMIME PRDDEYADYL DGFSLDDIEA TLPVFSHQSS SLVNEYRLRD  60
EQLDLSFLEI LNAVPSSNGL CASDMSSCVS SQSDSPDEFS DCVFKYINQI LVDENIVAKQ  120
SMFHDPLALQ ATEKSFYEVL GETYRPPCVN EESPEENLEY STNSSTSGST SNDSRSAVQT  180
PSLESPLLSS FGSTGSVAND GFSTLDSLIN THLVENIFTD NDSILQFNRG MEEASKFLPP  240
SKPLVIDLEK YNLPSKSRDS LSQAVVKKEM SEMDNLSNGS RGRKHYQMEN NGYEEERSSK  300
QPAVYVEEDL SDMLDQVAIC TDPGGPSMSA CEEPSRQVTK KLQQNGQSYG YSSGWITRSW  360
GGSSGEATDV RTLLVNCAQS VAADDRKTAN EQLRQIRQHA SPTGDAPQRL AHIFAAGLEA  420
RLAGTGSQFY ASKSAMTISA AEKLKACQVY LSACPFVKIA IFFANKVIYE AALASSTLHI  480
VDFGIEYGFQ WPVLIKHLAE RPGGPPKLRI TGIELPKPGF RPAEGVEETG RRLANYCAKY  540
NVPFEYNAIA TQNWETIKVE DLKLQRNECL AVHTQTRFKN LLDETLVVDC PRDGVLKLIR  600
DMKPDIFVPT VVNGSYSSPF FVTRFREALF HFSSMFDMVE ATLDRNDEQR FNFEKEFCGR  660
EVMNVIACEG AERVERPETY KQWQVRLLRA GFKYKPLNRD VVSKLRAKVK AGYHKDFVFD  720
EDGKWVLQGW KGRILHASSC WVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein