PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015370.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Protein Properties

Length: 626aa MW: 71459.9 Da PI: 7.1396

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015370.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.6	3e-10	5	77	17	99
E--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 17 vlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++pk+f ++ + k+ +l+ + r+W v + + k+ v+++GW++F +n+++e Df+vFk++ ++ + ++vf++ Cse_sc015370.1_g010.1 5 SIPKPFWTNLdE---GICKKAILR-RGRREWPVDI--SDKG---VFGDGWSKFLIDNEVQEFDFIVFKHQ--EKLVFEFMVFDR 77 799999965533...455566655.588*****..4444...9*********************65..455557778776 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MFLQSIPKPF WTNLDEGICK KAILRRGRRE WPVDISDKGV FGDGWSKFLI DNEVQEFDFI 60 VFKHQEKLVF EFMVFDRSTC ERHYPNLLDE MENEPLTKSD PIHIHDILNQ KAEQNKPQSK 120 RKVATSKKLK KHETLQKGKG NKFCTGIQLT EVIVEDNPVV DENLCDENKV NEQVDEDNAV 180 VQVQVFEEEQ STEYLVEDNS VLNDNHSGLC PKIKFTKGFI KKCKGLMEPK RTTGSKNDLN 240 NKPVLKRKGT EFTISEKEID NGAFAQSHTK KYKVDKKLSK ETRNDTMNEK GKEPEVVSHK 300 IKKQKGKRSI HRTIRTRSSP KALYSTITCL KPDQKRCLIE MGFGSLIGMF VDEIPAMLGY 360 YVVDKFDPEK MELMLHDGSI EVTAKAVHDM LGVPNGGKSI MSLEPRASDD PFIKDWKAQF 420 QTSEIRPNDI LDVIASSNDA GRMFKMNFLM LFANTMAACE SNGACSMTVL EQISDDVRVE 480 TLDWCGFILE CLKSSKGGWK REKSGCDAFP VIRQRPAIKC WNLVLMRCRA KLEVNGGGFG 540 KLPKREIESE TDLQEEVFHA KIEANYNIIY DELASLYLNL KEASSIFPLS DKLKQSREKF 600 AQVFGKKDLL NDNIIHNSHD DVVTDV

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MFLQSIPKPF WTNLDEGICK KAILRRGRRE WPVDISDKGV FGDGWSKFLI DNEVQEFDFI  60
VFKHQEKLVF EFMVFDRSTC ERHYPNLLDE MENEPLTKSD PIHIHDILNQ KAEQNKPQSK  120
RKVATSKKLK KHETLQKGKG NKFCTGIQLT EVIVEDNPVV DENLCDENKV NEQVDEDNAV  180
VQVQVFEEEQ STEYLVEDNS VLNDNHSGLC PKIKFTKGFI KKCKGLMEPK RTTGSKNDLN  240
NKPVLKRKGT EFTISEKEID NGAFAQSHTK KYKVDKKLSK ETRNDTMNEK GKEPEVVSHK  300
IKKQKGKRSI HRTIRTRSSP KALYSTITCL KPDQKRCLIE MGFGSLIGMF VDEIPAMLGY  360
YVVDKFDPEK MELMLHDGSI EVTAKAVHDM LGVPNGGKSI MSLEPRASDD PFIKDWKAQF  420
QTSEIRPNDI LDVIASSNDA GRMFKMNFLM LFANTMAACE SNGACSMTVL EQISDDVRVE  480
TLDWCGFILE CLKSSKGGWK REKSGCDAFP VIRQRPAIKC WNLVLMRCRA KLEVNGGGFG  540
KLPKREIESE TDLQEEVFHA KIEANYNIIY DELASLYLNL KEASSIFPLS DKLKQSREKF  600
AQVFGKKDLL NDNIIHNSHD DVVTDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06220.1	5e-06	B3 family protein