PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015376.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 329aa    MW: 37988.2 Da    PI: 8.0085
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015376.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161360148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+WT eEd +lv +++++G g+W+t + + g+ R++k+c++rw +yl
  Cse_sc015376.1_g010.1 13 KGPWTSEEDRKLVTYIEEHGHGSWRTLPLKAGLQRCGKSCRLRWTNYL 60
                           79********************************************97 PP
2Myb_DNA-binding50.83.7e-1666110147
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                            rg++T +E++ + +++++lG++ W++Ia++++ +Rt++++k++w+++
  Cse_sc015376.1_g010.1  66 RGKFTLQEEQTIMQLHALLGNK-WSAIASYLP-KRTDNEIKNYWNTH 110
                            89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGRSPSSEMG LKKGPWTSEE DRKLVTYIEE HGHGSWRTLP LKAGLQRCGK SCRLRWTNYL  60
RPDIKRGKFT LQEEQTIMQL HALLGNKWSA IASYLPKRTD NEIKNYWNTH ITKRLTKMGI  120
DPVTHKSRIR VATNLSHMTQ WENARLEAEA RLVRKSRLIS ESYQRIQDSF SPLTNESLVQ  180
HLSQPQPLCL DVLKTWQDIV LSKQSDLKGQ QTPLSTLNFF EKALSSHSNI KNGSMPILSP  240
TKNIDQPSSN IIMTTKDWEI SNEPSNVLEL TKEENVLDML EVNDILYQDL CMMEALTRPI  300
VDNIDNESHG NAFADKNDYW RQIIEELEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.11e-89MYB family protein