PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015404.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 158aa    MW: 17810.9 Da    PI: 6.9907
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015404.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26099.24e-3125126198
                 DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq...pkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklq 84 
                            aCaaC+++  +C++d +lapyf ++q   + + +nvh+lFG +++ k+l+++++e+ r+dam+sl+yeA+ar rdP+ G+++++ +lq
  Cse_sc015404.1_g020.1  25 ACAACRFHSTRCPPDSILAPYFSQAQydiQIQIQNVHELFGFDKIRKMLTNIDDETrRDDAMTSLMYEADARGRDPIGGCHRIVCALQ 112
                            7*********************8877433589********************888768****************************** PP

                 DUF260  85 qqleqlkaelallk 98 
                             q+++++ el+ + 
  Cse_sc015404.1_g020.1 113 GQYASARRELEFVT 126
                            *********99875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    
MSTQNNHPND NNNHPSSRKC STNPACAACR FHSTRCPPDS ILAPYFSQAQ YDIQIQIQNV  60
HELFGFDKIR KMLTNIDDET RRDDAMTSLM YEADARGRDP IGGCHRIVCA LQGQYASARR  120
ELEFVTQLNA LCKGMYASAK QKQDIVNDQG VDLDISVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.14e-23LBD family protein