PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015404.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family LBD
Protein Properties Length: 115aa    MW: 13090.1 Da    PI: 7.2911
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015404.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260100.41.7e-3122114798
                 DUF260   7 vlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeee.redamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                            + r+kCa+dC+lapyfp+++ k+f+n++klFG+s ++k++k+ +++e ++ a++s++yeA+arardP  G+ +++ +l qq++++++e
  Cse_sc015404.1_g030.1  22 FRRKKCAPDCILAPYFPHDRLKQFQNFRKLFGVSFITKTIKDHNDQEeKDGAVTSIIYEADARARDPAGGCSRILIELDQQIREAESE 109
                            6899*************************************9966554999************************************* PP

                 DUF260  94 lallk 98 
                            l+ +k
  Cse_sc015404.1_g030.1 110 LDIVK 114
                            99886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 115 aa     Download sequence    
MGQYSVASMP KICLMIDGPL IFRRKKCAPD CILAPYFPHD RLKQFQNFRK LFGVSFITKT  60
IKDHNDQEEK DGAVTSIIYE ADARARDPAG GCSRILIELD QQIREAESEL DIVKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.14e-30LBD family protein