PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015495.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ARF
Protein Properties Length: 653aa    MW: 72052.6 Da    PI: 8.0476
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015495.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B373.72.3e-23125226199
                            EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                     B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                            f k+lt+sd+++ g +++p+ +ae++         ++ +  t+  +d +g +W++++iyr++++r++lt+GW+ Fv+ ++L +gD++v
  Cse_sc015495.1_g010.1 125 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TILAKDVHGDTWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIV 210
                            89****************************996555555..89********************************************* PP

                            EEE-SSSEE..EEEEE-S CS
                     B3  82 Fkldgrsefelvvkvfrk 99 
                            F   + +++ l+v+++r+
  Cse_sc015495.1_g010.1 211 FL--RAENGDLCVGIRRA 226
                            **..4488999****997 PP
2Auxin_resp110.71.5e-36282365183
             Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 
                            a+++a ++++Fevv++Prast+eF+vk+  v++a+++++s+GmRfkm fetedss++++ +Gt+++++ +dp+rWp+S+Wr+L+
  Cse_sc015495.1_g010.1 282 AVKQAMSGQPFEVVFYPRASTPEFCVKAGLVKNAMQIRWSPGMRFKMPFETEDSSRISWfMGTISSIQVADPIRWPDSPWRLLQ 365
                            6789999***************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 653 aa     Download sequence    
MITFMDSKEK LKENEKCLDS QLWHACAGSM IQMPPVNSKV YYFPQGHAEH TAGNVDFRQL  60
RVSAWVPCRV SSIKFMADVD TDEVFAKIRL VPISNSGEFS SFDDEDNTGS GNGSGGDGSV  120
KPTSFAKTLT QSDANNGGGF SVPRYCAETI FPRLDYSADP PVQTILAKDV HGDTWKFRHI  180
YRGTPRRHLL TTGWSTFVNH KKLVAGDSIV FLRAENGDLC VGIRRAKRGI GGGPETSLSG  240
WNPAGGNCVV PYGGYGPLMR NGNVNGNSAV KAKVEVDAVI QAVKQAMSGQ PFEVVFYPRA  300
STPEFCVKAG LVKNAMQIRW SPGMRFKMPF ETEDSSRISW FMGTISSIQV ADPIRWPDSP  360
WRLLQVTWDE PDLLQNVKRV NPWLVELVST MPAIHMSPFS PPRKKCRPSQ HPDYPMESQI  420
PIPIPALCGP HAHLFNGPTS GPFGYHLPEN LNLHHHPASM QGARHTRYGL SLSDIHLNNK  480
LNSSFFPTPA KINQFFNKPT GSEPVSCLLT IGSSTTSTAS KEPETPKKSQ FVLFGQPILT  540
EEQISQSGNA SGSGSGSRET DMNLDTGHCK VFMESEDVGR TLDLSLLDSY EELCKKLANM  600
FKLESSIKLN RVHYWDVTGT LKQIGNKPFG EFIKTARRLT ILTDSSSENN VDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30080.10.0ARF family protein