PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015552.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 164aa    MW: 18484.8 Da    PI: 7.0023
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015552.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.75.8e-1659128169
                   FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69 
                            +fY++YAk++GFsvr+++++ +    + +t+r+f C + g+++ + +++++ +r+r+++r+gC+a ++++
  Cse_sc015552.1_g020.1  59 EFYCSYAKQCGFSVRRNRTRGKdGVGKGVTRRDFICHRGGYPHFKPSEDVNVQRNRKSSRCGCQAYMRIN 128
                            6****************99987456677********************9******************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MHEIASMMEE TSENSTDLSA DDIGTIEEIP ENSILSRQGS VNLVPFIGQR FVSQEAAYEF  60
YCSYAKQCGF SVRRNRTRGK DGVGKGVTRR DFICHRGGYP HFKPSEDVNV QRNRKSSRCG  120
CQAYMRINGL LEYTDHMDTL GSSLMTMQFV AISHLYGATL YCIV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.17e-41FAR1 family protein