PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015552.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family WRKY
Protein Properties Length: 224aa    MW: 24965.1 Da    PI: 4.588
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015552.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.18.6e-29133191259
                            --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                   WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                            +D ++WrKYGqK++kgs++pr+YY+C+++  C ++k+ve+s++d +++++ Y+geH h+
  Cse_sc015552.1_g030.1 133 NDTWAWRKYGQKPIKGSPYPRNYYKCSTTkACGARKQVEQSNTDSTIFIVSYSGEHIHP 191
                            7*************************99889***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MDDEWDLHAV VRSCNTISND ANATSGTNTT TNVEEFDDDF DNMEGLASEN DMNLFSYSNS  60
SENPLEGLEE VYKEGCSQPL TTNTVVVSFD DEQQLVTDAG SSSFTIETPT SRKRKNQQKK  120
VVVELTQEEL SNNDTWAWRK YGQKPIKGSP YPRNYYKCST TKACGARKQV EQSNTDSTIF  180
IVSYSGEHIH PRPTHRSPLA GSTRSNKFAT GNVPPISEDN TTHS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-40WRKY family protein