PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc015632.1_g010.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

bHLH

Protein Properties

Length: 306aa MW: 34568.1 Da PI: 7.9661

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc015632.1_g010.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.6	9.1e-13	128	175	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h +Er+RR+++ +f L +llP+ kK++Ka++Le A +YIk+Lq Cse_sc015632.1_g010.1 128 QEHVLAERKRREKLTRRFISLSTLLPEI-----KKMDKATVLEDASKYIKHLQ 175 67999********************7.....7****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence
MNQHQHTCTY SELVDPFSSH GFKGYMNLVT RNESNHATTV SENLDNQESY KATRTNPFTP 60 IGGCTSNTFT ISFGDHNEIN QNSLHGGFQL KYNDAIKPKV EMSLNELLDS IEIPKRVPST 120 RRNHRQAQEH VLAERKRREK LTRRFISLST LLPEIKKMDK ATVLEDASKY IKHLQNRVKE 180 LEQTSVGEKN IVLESTTSTR SKFHSSHEDD ASSYDKINPL PFSTDNDPGI KVRISGSHTL 240 VRIYCQRNSS LALKALIEME RLQFIIMCNN VLPISGDAAL ITIIAQMSGE IEMTATDLVN 300 CLKSSL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	134	139	ERKRRE
2	135	140	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-36	bHLH family protein