PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015774.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MIKC_MADS
Protein Properties Length: 236aa    MW: 27179.3 Da    PI: 9.4081
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015774.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.51.7e-28959151
                           S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
                 SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                           krienk+nrqvtfskRr+g+lKKA+E+SvLCda+v +++fs +gkl e+++
  Cse_sc015774.1_g010.1  9 KRIENKINRQVTFSKRRTGLLKKAHEISVLCDADVGLVVFSAKGKLCEFAT 59
                           79***********************************************86 PP
2K-box102.26.7e-34751741100
                  K-box   1 yqkssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelq 88 
                            y++++ ++++++ + +++ e+akLk + e Lq++qRhl+GedL+sLslkeLq+Le+q++++lk+iR +Kn++++e+i+ lqkk kelq
  Cse_sc015774.1_g010.1  75 YAERQLTATDNESHGRWTLEHAKLKCRFELLQKTQRHLKGEDLDSLSLKELQNLEHQIDTALKHIRLRKNQMMFESISVLQKKDKELQ 162
                            5677888889999*************************************************************************** PP

                  K-box  89 eenkaLrkklee 100
                            ++n+ L+kk++e
  Cse_sc015774.1_g010.1 163 NQNNVLSKKVKE 174
                            *********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MGRGRVTLKR IENKINRQVT FSKRRTGLLK KAHEISVLCD ADVGLVVFSA KGKLCEFATD  60
ASMERILERY ERYSYAERQL TATDNESHGR WTLEHAKLKC RFELLQKTQR HLKGEDLDSL  120
SLKELQNLEH QIDTALKHIR LRKNQMMFES ISVLQKKDKE LQNQNNVLSK KVKEVEKDLA  180
AQQPLVEQQN PDKMLHLDPY ISAPCQVGGD GVVEKIPGQA QPSIVLPPWM LQHMNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.11e-95MIKC_MADS family protein