PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015805.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB
Protein Properties Length: 230aa    MW: 26362.3 Da    PI: 6.3077
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015805.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.4e-131461148
                           TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                           +g+W+ eEde l+ ++ ++G  +W   ++  g+ R++k+c++rw +yl
  Cse_sc015805.1_g010.1 14 KGSWSHEEDEMLKSYISKYGIWNWCHMPKFAGLSRSGKSCRLRWMNYL 61
                           799*****************99************************97 PP
2Myb_DNA-binding51.72e-1667112148
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                            rg++++eE++++++ + +lG++ W++Ia++++ gR+++++k++w+++l
  Cse_sc015805.1_g010.1  67 RGNFSQEEEDIIIQSHSLLGNK-WAAIASKLP-GRSDNEIKNYWHTHL 112
                            89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MRSPSFEKKA GLKKGSWSHE EDEMLKSYIS KYGIWNWCHM PKFAGLSRSG KSCRLRWMNY  60
LKPNVKRGNF SQEEEDIIIQ SHSLLGNKWA AIASKLPGRS DNEIKNYWHT HLKKRMTHNL  120
VCQTKDKNEI NGSVTCEISD VQEIEDNKVN DHFELLFGQN SEDTSSSTSS ISSPMDSGFD  180
FNGDYYNLGS PGTVEDIQSF WQQLFPSGNS ELEIGHQDIS SDPVFQYLKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-52MYB family protein