PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc015855.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 191aa    MW: 21620 Da    PI: 6.5124
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc015855.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.51.5e-0859812447
                           HHHHHHHHTTTS-HHHHHHHHHHH CS
        Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                           W+++a++++ gRt++++k++w+++
  Cse_sc015855.1_g020.1 59 WSAVAARLP-GRTDNEIKNYWNTH 81
                           *********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MADWLDEEDP SAFPESFPTY QIHNKPRSRY DGASVFSSKD EGSENSYSSG DRSQSTSLWS  60
AVAARLPGRT DNEIKNYWNT HITKRLLRMG IDPVTHSPRF DLLEIPSILS SSFYSSSHSN  120
MFGVHQMVNP ELLRLAASLL SSPRNPYPNY AQQNGQENQF RNPYQVAVHY IAPLDRNCKT  180
APVLVPQQVI E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21440.13e-25MYB family protein