PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016053.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family DBB
Protein Properties Length: 212aa    MW: 23276 Da    PI: 6.3833
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016053.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.21.4e-07433534
               zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                            C+ +e+  ++lfC  ++  lC+ C ++ H
  Cse_sc016053.1_g020.1  4 LCDVCESAAAILFCAADEAALCRACDEKVH 33
                           7**************************998 PP
2zf-B_box24.94.1e-085291237
               zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
                           + ++C+ +e+ ++ ++C  +++ lC +C ++ H g    H
  Cse_sc016053.1_g020.1 52 DVQRCDICENAPAFFYCGIDGSSLCLQCDMNVHVGgkrtH 91
                           5789****************************96545555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MRTLCDVCES AAAILFCAAD EAALCRACDE KVHMCNKLAS RHVRVGLADP SDVQRCDICE  60
NAPAFFYCGI DGSSLCLQCD MNVHVGGKRT HGRYLLLRQR VEFPGDRSGR DDELGLQPGD  120
PGGEVRREQN NQPKATTRDN QHHRLSAIGM LENNNDGAGR MENKLFDLNA RPQRMHGQTS  180
NNQEQGMDIS GSGNNDSASV VPVGSFKREV DK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.12e-84DBB family protein