PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016130.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 375aa    MW: 40585.5 Da    PI: 9.5319
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016130.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.63.4e-06192211525
                            --SGGGGTS--TTTTT-SS-S CS
                zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                            +C  fa+ G C++G+ Ck+ H
  Cse_sc016130.1_g010.1 192 PCWSFAK-GSCRFGEACKYLH 211
                            677899*.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MAMNHLTTFV PEKLDVDAMN YSSWMYYFSH LCHGYGILDH LVDPIASSST TPPTDLPPKD  60
AEWTKIDFII RSWIFSTLAP SLRTRLVDLN PKTAKAAWTH LAAIFQDNKR PRAMALKAEL  120
GNLKLGALSI DGREPFPDLQ TVRSLLTTHE MRLKSRVQDP LVNATSASPM VLVAKTNPTP  180
RRGTFLEKVN NPCWSFAKGS CRFGEACKYL HNGVHGKSTL LPRTSGSVFA ISNVARSDMD  240
MLQTLLAKFG LNATNCFTNT FPVAYSVSQP SALPFGSAYL SSQPTHVGPM SFLPGSVGGS  300
TSSLPGFFSQ GVQPQQGGFN SSLDPTLPVQ FATGVSYQPV GSFPGVQLGQ FMPGAVRLGM  360
LFSDSGLVTK SSVAQ