PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016290.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

SBP

Protein Properties

Length: 148aa MW: 16447.4 Da PI: 9.4454

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016290.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	135.2	2e-42	56	132	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cq+++C++dlseak+yhrrhkvCe h+ka++v+v+g++qrfCqqCsrfhelsefD++krsCrrrLa+hnerrrk++ Cse_sc016290.1_g030.1 56 CCQADNCTSDLSEAKQYHRRHKVCELHAKAQAVIVAGTHQRFCQQCSRFHELSEFDDAKRSCRRRLAGHNERRRKSS 132 6**************************************************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 148 aa Download sequence
METTASSNQK LKMKKDFISD HHGDGLSGCG GGYLDVNTKK KKGVNASGGS SGNTRCCQAD 60 NCTSDLSEAK QYHRRHKVCE LHAKAQAVIV AGTHQRFCQQ CSRFHELSEF DDAKRSCRRR 120 LAGHNERRRK SSIEFKGTGK ELVCEKVD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	2e-43	SBP family protein