PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016311.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

Trihelix

Protein Properties

Length: 207aa MW: 23726.8 Da PI: 9.0723

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016311.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	73	5.2e-23	55	132	2	84
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdq 84 W+++e+++Li++r e+e ++ +k++k+lWe v++km+e g+ rs qCk+kw+nl +ryk +++ + ++++p+fd+ Cse_sc016311.1_g030.1 55 WSERETRDLIAIRGELEGDFVVSKRNKGLWEVVGSKMKELGYARSGDQCKCKWKNLVTRYKGKETSGDS-----TRSFPFFDE 132 *************************************************************99888776.....456899985 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MFNTNTGSDM NPNNNETLAH LTQMMMMNIP PQEQQPGIIS GGVGEVEEYG RVAAWSERET 60 RDLIAIRGEL EGDFVVSKRN KGLWEVVGSK MKELGYARSG DQCKCKWKNL VTRYKGKETS 120 GDSTRSFPFF DEPHILFTRT SANTPQTPFD PEATSSRSKK RVTRTDSYQS LEEISEDEDE 180 KNITKLPMPP RKKPFREKKP FREKRIL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38250.1	1e-26	Trihelix family protein