PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016456.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family GATA
Protein Properties Length: 361aa    MW: 40253.7 Da    PI: 9.9834
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016456.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.95.8e-183872135
                   GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                           C+ Cgt+kTplWR gp g+k+LCnaCG++ rk+++
  Cse_sc016456.1_g010.1 38 CADCGTSKTPLWRGGPAGPKSLCNACGIRSRKRRR 72
                           ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MGDVSDKGSE CEDMVVMSPE GCAGSISSDG GDSFIKTCAD CGTSKTPLWR GGPAGPKSLC  60
NACGIRSRKR RRALLCVSTK DDKKPKKTTT TITTTTTSGG DSQNSGLTTI CKSDYMGDLC  120
LKKRIMALGS EVLVQRPRSK VTKHRRKPSE EEKAAYLLMA ISCGGRKKRP TKRNKTDVPD  180
DESESEVEIV LAHSRWSEVE ETLLASCYVA VSEDGQIRND QKNDSFSKRV LAKFNEVSHH  240
KRTKDMLTGK WATLNPNCQR FNAIYKRLRR VGKSGENEGD LMRRARQAYR DESQTENKKF  300
TQDGAWAILK EHPKWDSPEP VDSVDLTRHA ELFGDDLRPR LPGKQRASKK IKGKLVEHRG  360
K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16872RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.14e-27GATA family protein