PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016575.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family NAC
Protein Properties Length: 261aa    MW: 29444.3 Da    PI: 9.5462
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016575.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM165.61.7e-51141421128
                    NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgk 88 
                            lppGfrFhPtdeelvv+yL++kv++++l++ ++i+evd++k++PwdLp      e+e +fFs+r+ ky++g+r+nrat sgyWkatg 
  Cse_sc016575.1_g030.1  14 LPPGFRFHPTDEELVVQYLRRKVHSSPLPA-SIIPEVDVCKSDPWDLPGD---MENERFFFSTREVKYPNGNRSNRATLSGYWKATGL 97 
                            79****************************.89***************54...46799****************************** PP

                    NAM  89 dkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                            dk+++s+     ++ +vg+kktLvfykg+ p+g++tdW+mheyrl
  Cse_sc016575.1_g030.1  98 DKQIVSSsssknQQVVVGMKKTLVFYKGKPPSGTRTDWIMHEYRL 142
                            *****99777655555***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDKVNFVKNG VLRLPPGFRF HPTDEELVVQ YLRRKVHSSP LPASIIPEVD VCKSDPWDLP  60
GDMENERFFF STREVKYPNG NRSNRATLSG YWKATGLDKQ IVSSSSSKNQ QVVVGMKKTL  120
VFYKGKPPSG TRTDWIMHEY RLASQGVENW VLCRIFLKKR GNKKEEEKEY KETIIEVGNV  180
VNNTNVEMKP KMKPVFYDFL AKSSLRKEKT GDLNLAPAYS SSGSGSSGVT DAACGGYGSG  240
EHEHEDETSD HVSSFRKKQL P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-89NAC family protein