PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016603.1_g070.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB_related

Protein Properties

Length: 116aa MW: 13555.5 Da PI: 9.6571

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016603.1_g070.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.3	6.3e-12	36	77	3	46
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++T+eEde l ++vk + + W++ ++ ++ gR++k c++rw + Cse_sc016603.1_g070.1 36 SFTPEEDEMLQNLVKNHSRN-WSLTSNSIP-GRSAKTCRLRWET 77 79*************966.*****.*********75 PP

Sequence ? help Back to Top
Protein Sequence Length: 116 aa Download sequence
MYVKVVFNLL VIYASGGQDG KSDKTCELRW FSLQKSFTPE EDEMLQNLVK NHSRNWSLTS 60 NSIPGRSAKT CRLRWETVWN PLQIRKDIEN RWNSTLKGKS ISMTNEDITI LNFEKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23290.1	7e-14	MYB family protein