PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016632.1_g020.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

C2H2

Protein Properties

Length: 183aa MW: 20634.2 Da PI: 6.7425

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016632.1_g020.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.9	7.4e-05	49	71	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H Cse_sc016632.1_g020.1 49 YSCNFCRREFRSAQALGGHMNVH 71 99*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 183 aa Download sequence
MEQYSQYLMW VKNKSSIFNN SFSHSWEEQA FAEDARGPLG GFVWPPRSYS CNFCRREFRS 60 AQALGGHMNV HRRERAKLKQ SSNSTQQNPK SILESTTPSC FRSPDLASRI SSILVQESAT 120 LVSNSDAKSC VCEEVVVLGP VGTNLYLGFD ECEDEVMNCK RQKTGVSPLV IEDQVDLELR 180 LAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	72	80	RRERAKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06070.1	4e-30	C2H2 family protein