PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016682.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family SBP
Protein Properties Length: 211aa    MW: 24316.5 Da    PI: 10.2591
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016682.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP133.95.3e-42127203177
                            --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
                    SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                            +CqvegC++d++++k+yhrrhkvCevh+kap v+++g +qrfCqqCsrfh+lsefD++krsCrrrLa+hnerrrk++
  Cse_sc016682.1_g020.1 127 CCQVEGCTTDMTNCKTYHRRHKVCEVHAKAPIVVTNGCQQRFCQQCSRFHDLSEFDDAKRSCRRRLAGHNERRRKST 203
                            6**************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MKRVSQRYRD ESKSGNKAFT QDGAWEILKQ HAKWNLPDPV DTVNPRPRPP GKPRASKIQN  60
RKPRRALRES METTKSGRVV KIMNNKLKNE MMDECEDDDD ENFGESSRKK KVLGKRGSGS  120
AVSVQPCCQV EGCTTDMTNC KTYHRRHKVC EVHAKAPIVV TNGCQQRFCQ QCSRFHDLSE  180
FDDAKRSCRR RLAGHNERRR KSTYENYGGN L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.11e-31SBP family protein