PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc016886.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

MYB

Protein Properties

Length: 255aa MW: 29590.3 Da PI: 8.068

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc016886.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.5e-16	10	57	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +lv +v+++G ++W+ Ia+ g++R++k+c++rw +yl Cse_sc016886.1_g030.1 10 KGPWTEHEDVQLVSYVNMFGDRRWDFIAKVSGLKRSGKSCRLRWVNYL 57 79********************************************97 PP
2	Myb_DNA-binding	54.8	2.1e-17	63	108	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++++ ++G++ W++Ia++++ gRt++++k++w++++ Cse_sc016886.1_g030.1 63 RGKMTPHEERRILELHSKWGNR-WSRIAQKLP-GRTDNEIKNYWRTHM 108 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MMQEDEMMRK GPWTEHEDVQ LVSYVNMFGD RRWDFIAKVS GLKRSGKSCR LRWVNYLHPG 60 LKRGKMTPHE ERRILELHSK WGNRWSRIAQ KLPGRTDNEI KNYWRTHMRK KAQEKKKALS 120 PSSSLSNSSS CSSICTSNPT IDSMPMTETE ETSFYDTGGL EMITIKKNKK NNVIMKSTAT 180 SISDSSELQD GYNSMDEIWK DIDLLEDDGI RHFLGTYSEI SPSSAWDYSL NTSWMIDGQD 240 ELGSDMYYPD NKRKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G46130.1	1e-74	MYB family protein