PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016911.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 261aa    MW: 30490.3 Da    PI: 10.0402
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016911.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR148.82.4e-15293590
                   FAR1  5 eYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnH 87
                           +YA++ GF vrks +k+  r+g ++++ +vC++eg ++  + +      ++k++r+++ + t+Cka+++ ++   + k+++t +++ HnH
  Cse_sc016911.1_g010.1  2 KYASKGGFVVRKSCQKRL-RSGIVKQKYLVCNREGCPKGIHVDtldlenSDKQKRSSNLHITSCKARVMFELIPgSTKYKLTVFNSIHNH 90
                           7***********998887.8898*************99988888999888899999999***************9*************** PP

                   FAR1 88 ela 90
                           el 
  Cse_sc016911.1_g010.1 91 ELE 93
                           *96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MKYASKGGFV VRKSCQKRLR SGIVKQKYLV CNREGCPKGI HVDTLDLENS DKQKRSSNLH  60
ITSCKARVMF ELIPGSTKYK LTVFNSIHNH ELERKEYKHL SKTERQLTYA EQLFIVKAAS  120
VNIGATRAHH LLIGLKGSYL LVHGTTVDFK NFFRSICSKI YDHTDFKRKF NQIVWNMYIG  180
PVEFEYQWGK LLDEFNLHNH KWLTKMFRIR SCWIPAFFVD YPLCGLMRTT SRSESENSFF  240
SQFTNSGSTL MNFMNCFETA M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.17e-13FAR1 family protein