PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016925.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family MYB_related
Protein Properties Length: 257aa    MW: 28066 Da    PI: 10.7972
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016925.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding285.2e-0980108129
                            TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
        Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                            r++W++eE+  l+ av+++G g+W+t  r
  Cse_sc016925.1_g020.1  80 RKPWSAEEEHELLAAVQRYGEGNWATMLR 108
                            799**********************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MKTNKAAALA KFLERKSQEP SGLSSINPKL VELAVKNAKE TVRAIPVYVP TQVIPTVSSA  60
EGLDNANVLS NNIYPPRRKR KPWSAEEEHE LLAAVQRYGE GNWATMLRGD FRKGNTIKRR  120
QNNPIIKTGS QPSEMQLAAR QAFNMAVDKP GLDIPKSASP IGMANPGNIS AQPMVIDSPS  180
YDSTPTGPKR PFPRSQPFST RPLPTGSAAG ARIATESDAA EIRRQQLKVN AIHIRTPRPP  240
PQHETHIGYS SISPKEP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17682PRRKRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58220.16e-17MYB_related family protein