PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc016965.1_g010.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 207aa    MW: 22892.9 Da    PI: 5.3276
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc016965.1_g010.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.93.7e-09134206168
                   FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk......tekerrtraetrtgCkaklkv 68 
                            ++Y++YA+  GF+ +k  ++ + ++g +  +  +C+keg +++ + +       ek++r+++   tgC+a++++
  Cse_sc016965.1_g010.1 134 DMYSTYAEAGGFQFKKPGQRLT-KSGIVQAKYIMCNKEGAPRHINVDtldpkhGEKQKRNTTLLVTGCQARIML 206
                            58*************9998887.7888999999*******9998888899988888889999999******987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MKPPPDSLKA PPDSLKPPSN HTNQTAGIIE TTTGLIEAAG IKFIKTVTIT SNRTNHQEIM  60
PPVDETDLIE VPVDESQDKD DGVNETTDSM RSPRPTLYEH TLCGPPSYIT LGVHLPFVVP  120
EEGKYYDTIE EAIDMYSTYA EAGGFQFKKP GQRLTKSGIV QAKYIMCNKE GAPRHINVDT  180
LDPKHGEKQK RNTTLLVTGC QARIMLE