PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017235.1_g030.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family FAR1
Protein Properties Length: 117aa    MW: 13451.4 Da    PI: 10.0819
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017235.1_g030.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.22.3e-0720107790
                   FAR1   7 AkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.......dgkwevtkleleHnH 87 
                            A++ GF ++k  +k+    g  ++ +f+Cs++g++++e  + ++ +r++ + +++C  +l  k  k       ++ w +    l HnH
  Cse_sc017235.1_g030.1  20 AQSNGFLMVKGITKTD--RGYKYSIEFKCSRHGTSAREGLE-DELERQTGTAKINCPFRLLAKFIKgrtgttkTSSWILRVKCLRHNH 104
                            78899*9999988877..66679***************999.8888889999*****999877554332434456677777779**** PP

                   FAR1  88 ela 90 
                            +++
  Cse_sc017235.1_g030.1 105 DFV 107
                            986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
MYKVVFRDEV VLTDWVQSTA QSNGFLMVKG ITKTDRGYKY SIEFKCSRHG TSAREGLEDE  60
LERQTGTAKI NCPFRLLAKF IKGRTGTTKT SSWILRVKCL RHNHDFVDSF HGFSHAM