PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017237.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family bHLH
Protein Properties Length: 169aa    MW: 19279.1 Da    PI: 9.5261
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017237.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH246.8e-086289330
                           HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                    HLH  3 rahnerErrRRdriNsafeeLrellPka 30
                           r+h e+ErrRR+riN  ++ L +l+P  
  Cse_sc017237.1_g020.1 62 RNHGEAERRRRERINGHLSMLSSLVPGT 89
                           5799**********************74 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MMILSHVRTT SSSSSVVLDN EKGEIVRAFV TPGNIRHTLH DDHDHENCQK DAKGEKAIMA  60
LRNHGEAERR RRERINGHLS MLSSLVPGTT KLLISSRAFT ISPLERRGIV NRARPWLWAA  120
WANARGIKQV SEDIETVNHI FFSCEMAKDL WALLARRWEL DIPICSNFL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16873ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56770.19e-07bHLH family protein