PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017309.1_g020.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family C3H
Protein Properties Length: 168aa    MW: 18581.7 Da    PI: 4.6002
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017309.1_g020.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.98.6e-095778426
                           ---SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH  4 elCrffartGtCkyGdrCkFaHg 26
                           e C f+++ GtC  G+rC++ H+
  Cse_sc017309.1_g020.1 57 EVCTFYQK-GTCVNGSRCRYDHV 78
                           68******.*************7 PP
2zf-CCCH171e-05117136626
                            -SGGGGTS--TTTTT-SS-SS CS
                zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                            C+ fa+ G C+ G++C++ Hg
  Cse_sc017309.1_g020.1 117 CS-FAAAGNCPGGENCPYVHG 136
                            66.*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MSPNRQGVSP PTTCDADNIQ EDQDSIVEAP RTGEPQTYVE HSVLHAELEG ERMNIDEVCT  60
FYQKGTCVNG SRCRYDHVKF VVSELVSETT DPVTGENELL NDVVQARSTN PADIVMCSFA  120
AAGNCPGGEN CPYVHGDLCS TCKKECLHPF RLAEREEHKK MCEKKATI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.18e-32C3H family protein