PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Cse_sc017511.1_g030.1

Organism

Chrysanthemum seticuspe

Taxonomic ID

1111766

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum

Family

TCP

Protein Properties

Length: 272aa MW: 29084.7 Da PI: 6.0377

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Cse_sc017511.1_g030.1	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.5	1.4e-35	40	112	1	73
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec 73 aa+++++++++hTkv+gR+RR+Rl+a+ca r+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ Cse_sc017511.1_g030.1 40 AAPRRRSTKDRHTKVEGRGRRIRLPATCASRIFQLTRELGHKSDGETIRWLLEHAEPAIIQATGTGTVPAIAV 112 689**************************************************************98888444 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MASITTQFHE SEQNGNDDVI TAVFKQEPPE DIFTAIVAAA APRRRSTKDR HTKVEGRGRR 60 IRLPATCASR IFQLTRELGH KSDGETIRWL LEHAEPAIIQ ATGTGTVPAI AVNVNGVLKI 120 PTTTEGEKTG VKSRKRACNS EFYDVNDLND GNSLVNAGFA PVAPVVPQGL VSVWGIGGLG 180 GGPHNGFFIP AYQPQLWAVP VGFTGMAQPV SSFVSADGGS EDKLGNVTTA MAPSLSSSSA 240 GVLRDFSLEV YEKRELQFMV PCSNDENESS KT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	8e-68	TCP family protein