PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cse_sc017545.1_g040.1
Organism
Chrysanthemum seticuspe
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; campanulids; Asterales; Asteraceae; Asteroideae; Anthemideae; Artemisiinae; Chrysanthemum
Family ERF
Protein Properties Length: 180aa    MW: 20438.9 Da    PI: 9.4011
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cse_sc017545.1_g040.1genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2521.8e-161968255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           ++ GVr+++ +grWv+eI+d  +  ++ r +lg+++t+eeAa a++  ++ l+g
  Cse_sc017545.1_g040.1 19 KFLGVRQRP-SGRWVSEIKDS-T--RNLRLWLGTYDTPEEAAMAYDSVARILRG 68
                           688******.7*********2.2..34**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MPSKGDEDDR NKTLGKPRKF LGVRQRPSGR WVSEIKDSTR NLRLWLGTYD TPEEAAMAYD  60
SVARILRGRN AKTNFKYECL IATHEEISNL LSRNPKLFHF LKYATMKTFS SSLRASDIVN  120
NITQDETPLA CSWASCDDGL RVSFDSQDDG ESLPRLRSST RNSKVYSSVY VAPSFNVTKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-25ERF family protein